Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.23□□□□□ -0.61
CMC4P56277 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
CMC4P56277 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.23□□□□□ -0.61
CMC4P56277 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 AC133552.6-201ENST00000613406 534 ntBASIC11.23□□□□□ -0.61
CMC4P56277 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 MIR6805-201ENST00000615055 62 ntBASIC11.23□□□□□ -0.61
CMC4P56277 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 AHCYP2-201ENST00000430630 1300 ntBASIC11.23□□□□□ -0.61
CMC4P56277 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 FP325330.2-201ENST00000624219 5630 ntBASIC11.23□□□□□ -0.61
CMC4P56277 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC11.23□□□□□ -0.61
CMC4P56277 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CMC4P56277 AL138709.1-201ENST00000614840 1693 ntBASIC11.23□□□□□ -0.61
CMC4P56277 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 AC104640.1-201ENST00000562617 2109 ntBASIC11.23□□□□□ -0.61
CMC4P56277 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
CMC4P56277 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.22□□□□□ -0.61
CMC4P56277 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.22□□□□□ -0.61
CMC4P56277 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 AC006001.1-201ENST00000325130 474 ntBASIC11.22□□□□□ -0.61
CMC4P56277 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
CMC4P56277 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.22□□□□□ -0.61
CMC4P56277 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 GK-202ENST00000378941 458 ntTSL 3 BASIC11.22□□□□□ -0.61
CMC4P56277 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.22□□□□□ -0.61
CMC4P56277 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 FO681548.1-201ENST00000455617 1132 ntBASIC11.22□□□□□ -0.61
CMC4P56277 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.22□□□□□ -0.61
CMC4P56277 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.22□□□□□ -0.61
CMC4P56277 AC106760.1-201ENST00000508690 800 ntBASIC11.22□□□□□ -0.61
CMC4P56277 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.22□□□□□ -0.61
CMC4P56277 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CMC4P56277 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.22□□□□□ -0.61
CMC4P56277 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.22□□□□□ -0.61
CMC4P56277 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 RPSAP52-203ENST00000622976 1023 ntBASIC11.22□□□□□ -0.61
CMC4P56277 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CMC4P56277 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.22□□□□□ -0.61
CMC4P56277 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CMC4P56277 AL139384.1-201ENST00000612143 3047 ntBASIC11.22□□□□□ -0.61
CMC4P56277 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms