Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH12P55289 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 AC087386.2-201ENST00000623212 4637 ntBASIC14.13□□□□□ -0.15
CDH12P55289 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDH12P55289 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH12P55289 AC092580.3-201ENST00000430932 139 ntBASIC14.13□□□□□ -0.15
CDH12P55289 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH12P55289 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH12P55289 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH12P55289 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.13□□□□□ -0.15
CDH12P55289 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH12P55289 AC044860.1-202ENST00000559481 777 ntBASIC14.13□□□□□ -0.15
CDH12P55289 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH12P55289 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH12P55289 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.13□□□□□ -0.15
CDH12P55289 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH12P55289 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH12P55289 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH12P55289 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH12P55289 AC093028.1-201ENST00000622998 982 ntBASIC14.13□□□□□ -0.15
CDH12P55289 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH12P55289 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH12P55289 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDH12P55289 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH12P55289 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDH12P55289 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDH12P55289 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDH12P55289 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH12P55289 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CDH12P55289 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH12P55289 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CDH12P55289 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDH12P55289 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 AC010327.5-201ENST00000586923 3061 ntBASIC14.12□□□□□ -0.15
CDH12P55289 LILRP1-201ENST00000444199 1370 ntBASIC14.12□□□□□ -0.15
CDH12P55289 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH12P55289 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH12P55289 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH12P55289 AP001160.2-201ENST00000596071 487 ntBASIC14.12□□□□□ -0.15
CDH12P55289 AL844908.2-201ENST00000609461 460 ntBASIC14.12□□□□□ -0.15
CDH12P55289 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CDH12P55289 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDH12P55289 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH12P55289 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH12P55289 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CDH12P55289 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDH12P55289 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH12P55289 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH12P55289 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms