Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CICP23-201ENST00000605013 2741 ntBASIC16.98■□□□□ 0.31
USP11P51784 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.98■□□□□ 0.31
USP11P51784 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
USP11P51784 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.98■□□□□ 0.31
USP11P51784 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
USP11P51784 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.98■□□□□ 0.31
USP11P51784 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.98■□□□□ 0.31
USP11P51784 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.98■□□□□ 0.31
USP11P51784 AL136309.1-201ENST00000403917 691 ntBASIC16.98■□□□□ 0.31
USP11P51784 CHMP1AP1-201ENST00000445563 662 ntBASIC16.98■□□□□ 0.31
USP11P51784 HOMER2P2-201ENST00000451621 847 ntBASIC16.98■□□□□ 0.31
USP11P51784 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.98■□□□□ 0.31
USP11P51784 ALG3P1-201ENST00000508806 1114 ntBASIC16.98■□□□□ 0.31
USP11P51784 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.98■□□□□ 0.31
USP11P51784 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.98■□□□□ 0.31
USP11P51784 AC131206.1-201ENST00000538078 1211 ntBASIC16.98■□□□□ 0.31
USP11P51784 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
USP11P51784 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.98■□□□□ 0.31
USP11P51784 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.98■□□□□ 0.31
USP11P51784 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.98■□□□□ 0.31
USP11P51784 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
USP11P51784 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
USP11P51784 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
USP11P51784 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.98■□□□□ 0.31
USP11P51784 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP11P51784 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.98■□□□□ 0.31
USP11P51784 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.98■□□□□ 0.31
USP11P51784 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
USP11P51784 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
USP11P51784 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
USP11P51784 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.97■□□□□ 0.31
USP11P51784 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.97■□□□□ 0.31
USP11P51784 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
USP11P51784 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.97■□□□□ 0.31
USP11P51784 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
USP11P51784 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.97■□□□□ 0.31
USP11P51784 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.97■□□□□ 0.31
USP11P51784 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.97■□□□□ 0.31
USP11P51784 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.97■□□□□ 0.31
USP11P51784 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.97■□□□□ 0.31
USP11P51784 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP11P51784 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
USP11P51784 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.97■□□□□ 0.31
USP11P51784 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 LINC02228-204ENST00000642115 2962 ntBASIC16.97■□□□□ 0.31
USP11P51784 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.97■□□□□ 0.31
USP11P51784 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP11P51784 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
USP11P51784 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.96■□□□□ 0.31
USP11P51784 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
USP11P51784 AL355994.2-201ENST00000447882 704 ntBASIC16.96■□□□□ 0.31
USP11P51784 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.96■□□□□ 0.31
USP11P51784 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.96■□□□□ 0.31
USP11P51784 GCOM2-201ENST00000509133 1104 ntBASIC16.96■□□□□ 0.31
USP11P51784 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.96■□□□□ 0.31
USP11P51784 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USP11P51784 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.96■□□□□ 0.31
USP11P51784 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms