Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
HCFC1P51610 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 AC008805.1-201ENST00000590892 364 ntBASIC13.04□□□□□ -0.32
HCFC1P51610 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 AC012044.1-201ENST00000603431 297 ntBASIC13.04□□□□□ -0.32
HCFC1P51610 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.04□□□□□ -0.32
HCFC1P51610 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.04□□□□□ -0.32
HCFC1P51610 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HCFC1P51610 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HCFC1P51610 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.04□□□□□ -0.32
HCFC1P51610 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.04□□□□□ -0.32
HCFC1P51610 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 AL627389.1-201ENST00000413508 1182 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.03□□□□□ -0.32
HCFC1P51610 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.03□□□□□ -0.32
HCFC1P51610 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.03□□□□□ -0.32
HCFC1P51610 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.03□□□□□ -0.32
HCFC1P51610 DUX4L46-201ENST00000566845 751 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HCFC1P51610 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
HCFC1P51610 RPL17P45-201ENST00000586289 509 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 AL162426.1-201ENST00000624141 743 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.03□□□□□ -0.32
HCFC1P51610 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.03□□□□□ -0.32
HCFC1P51610 AL359258.3-201ENST00000622910 2331 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 E2F3P2-201ENST00000447755 1422 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.03□□□□□ -0.32
HCFC1P51610 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.03□□□□□ -0.32
HCFC1P51610 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.03□□□□□ -0.32
HCFC1P51610 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.03□□□□□ -0.32
HCFC1P51610 AC011742.3-201ENST00000439053 820 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.03□□□□□ -0.32
HCFC1P51610 MIR4750-201ENST00000584564 56 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 AC006453.1-201ENST00000636037 1257 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
HCFC1P51610 AC006058.4-201ENST00000624016 1670 ntBASIC13.03□□□□□ -0.32
HCFC1P51610 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.03□□□□□ -0.32
HCFC1P51610 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HCFC1P51610 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HCFC1P51610 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.02□□□□□ -0.32
HCFC1P51610 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HCFC1P51610 TBC1D3J-201ENST00000620719 1426 ntBASIC13.02□□□□□ -0.32
HCFC1P51610 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HCFC1P51610 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HCFC1P51610 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HCFC1P51610 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.02□□□□□ -0.32
HCFC1P51610 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.02□□□□□ -0.32
HCFC1P51610 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.02□□□□□ -0.33
HCFC1P51610 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 AC098935.1-201ENST00000446057 611 ntBASIC13.02□□□□□ -0.33
HCFC1P51610 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.02□□□□□ -0.33
HCFC1P51610 RPL18P13-201ENST00000478088 569 ntBASIC13.02□□□□□ -0.33
HCFC1P51610 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.02□□□□□ -0.33
HCFC1P51610 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.02□□□□□ -0.33
HCFC1P51610 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.02□□□□□ -0.33
HCFC1P51610 SNORD3B-2-202ENST00000571722 791 ntBASIC13.02□□□□□ -0.33
HCFC1P51610 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.02□□□□□ -0.33
HCFC1P51610 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.02□□□□□ -0.33
HCFC1P51610 AL132994.2-201ENST00000603120 687 ntBASIC13.02□□□□□ -0.33
HCFC1P51610 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.02□□□□□ -0.33
HCFC1P51610 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HCFC1P51610 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
HCFC1P51610 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms