Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC9A3P48764 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC9A3P48764 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SLC9A3P48764 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
SLC9A3P48764 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SLC9A3P48764 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC9A3P48764 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC9A3P48764 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC9A3P48764 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC9A3P48764 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 AC087499.5-201ENST00000452760 1342 ntBASIC13.93□□□□□ -0.18
SLC9A3P48764 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC9A3P48764 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC9A3P48764 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC9A3P48764 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 KLF2P3-201ENST00000451977 1087 ntBASIC13.93□□□□□ -0.18
SLC9A3P48764 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 AC067863.1-201ENST00000494933 530 ntBASIC13.93□□□□□ -0.18
SLC9A3P48764 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC9A3P48764 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC9A3P48764 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC9A3P48764 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SLC9A3P48764 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 AC140878.1-201ENST00000565277 250 ntBASIC13.93□□□□□ -0.18
SLC9A3P48764 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC9A3P48764 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC9A3P48764 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SLC9A3P48764 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SLC9A3P48764 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SLC9A3P48764 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC9A3P48764 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms