Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.87□□□□□ -0.19
RFC3P40938 AC099548.2-209ENST00000480264 625 ntBASIC13.87□□□□□ -0.19
RFC3P40938 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.87□□□□□ -0.19
RFC3P40938 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 AC243960.2-201ENST00000600996 747 ntBASIC13.87□□□□□ -0.19
RFC3P40938 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.87□□□□□ -0.19
RFC3P40938 MIR6869-201ENST00000619434 62 ntBASIC13.87□□□□□ -0.19
RFC3P40938 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.87□□□□□ -0.19
RFC3P40938 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.87□□□□□ -0.19
RFC3P40938 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFC3P40938 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RFC3P40938 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.86□□□□□ -0.19
RFC3P40938 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.86□□□□□ -0.19
RFC3P40938 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.86□□□□□ -0.19
RFC3P40938 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RFC3P40938 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.86□□□□□ -0.19
RFC3P40938 EIF3FP3-201ENST00000434851 1086 ntBASIC13.86□□□□□ -0.19
RFC3P40938 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.86□□□□□ -0.19
RFC3P40938 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.86□□□□□ -0.19
RFC3P40938 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.86□□□□□ -0.19
RFC3P40938 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.86□□□□□ -0.19
RFC3P40938 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RFC3P40938 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.86□□□□□ -0.19
RFC3P40938 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.86□□□□□ -0.19
RFC3P40938 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.86□□□□□ -0.19
RFC3P40938 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.86□□□□□ -0.19
RFC3P40938 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.86□□□□□ -0.19
RFC3P40938 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.86□□□□□ -0.19
RFC3P40938 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.86□□□□□ -0.19
RFC3P40938 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.86□□□□□ -0.19
RFC3P40938 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.86□□□□□ -0.19
RFC3P40938 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.86□□□□□ -0.19
RFC3P40938 PRSS30P-206ENST00000641773 873 ntBASIC13.86□□□□□ -0.19
RFC3P40938 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 KRT8P14-201ENST00000414254 1442 ntBASIC13.86□□□□□ -0.19
RFC3P40938 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 AC022532.1-201ENST00000624563 1728 ntBASIC13.86□□□□□ -0.19
RFC3P40938 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.86□□□□□ -0.19
RFC3P40938 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFC3P40938 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
RFC3P40938 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
RFC3P40938 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.85□□□□□ -0.19
RFC3P40938 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RFC3P40938 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms