Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.43□□□□□ -0.1
GPC1P35052 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 INGX-202ENST00000489074 768 ntBASIC14.43□□□□□ -0.1
GPC1P35052 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC1P35052 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.43□□□□□ -0.1
GPC1P35052 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC1P35052 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.43□□□□□ -0.1
GPC1P35052 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 GRK6P1-201ENST00000400595 1711 ntBASIC14.43□□□□□ -0.1
GPC1P35052 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
GPC1P35052 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
GPC1P35052 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC1P35052 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.43□□□□□ -0.1
GPC1P35052 AC126335.2-201ENST00000623362 4637 ntBASIC14.43□□□□□ -0.1
GPC1P35052 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
GPC1P35052 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.43□□□□□ -0.1
GPC1P35052 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
GPC1P35052 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
GPC1P35052 PEG13-201ENST00000631594 5667 ntBASIC14.42□□□□□ -0.1
GPC1P35052 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.42□□□□□ -0.1
GPC1P35052 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 AC104457.1-201ENST00000401024 814 ntBASIC14.42□□□□□ -0.1
GPC1P35052 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.42□□□□□ -0.1
GPC1P35052 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.42□□□□□ -0.1
GPC1P35052 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 AC023310.3-201ENST00000557027 670 ntBASIC14.42□□□□□ -0.1
GPC1P35052 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.42□□□□□ -0.1
GPC1P35052 AC100756.1-201ENST00000562736 682 ntBASIC14.42□□□□□ -0.1
GPC1P35052 AC138749.3-201ENST00000567691 622 ntBASIC14.42□□□□□ -0.1
GPC1P35052 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.42□□□□□ -0.1
GPC1P35052 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 AL049840.4-201ENST00000602422 811 ntBASIC14.42□□□□□ -0.1
GPC1P35052 AC116165.1-201ENST00000611806 668 ntBASIC14.42□□□□□ -0.1
GPC1P35052 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.42□□□□□ -0.1
GPC1P35052 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
GPC1P35052 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GPC1P35052 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GPC1P35052 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GPC1P35052 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC1P35052 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC1P35052 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 MRPS18AP1-201ENST00000414458 589 ntBASIC14.41□□□□□ -0.1
GPC1P35052 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.41□□□□□ -0.1
GPC1P35052 MEP1AP4-201ENST00000423244 1087 ntBASIC14.41□□□□□ -0.1
GPC1P35052 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms