Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC6A4P31645 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A4P31645 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A4P31645 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A4P31645 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SLC6A4P31645 CICP23-201ENST00000605013 2741 ntBASIC15.42■□□□□ 0.06
SLC6A4P31645 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A4P31645 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
SLC6A4P31645 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A4P31645 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SLC6A4P31645 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A4P31645 BTBD6P1-201ENST00000412176 1267 ntBASIC15.42■□□□□ 0.06
SLC6A4P31645 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SLC6A4P31645 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 AC100850.1-201ENST00000506768 649 ntBASIC15.42■□□□□ 0.06
SLC6A4P31645 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC6A4P31645 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC6A4P31645 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.42■□□□□ 0.06
SLC6A4P31645 AL358472.3-201ENST00000608147 415 ntBASIC15.42■□□□□ 0.06
SLC6A4P31645 AC091271.1-201ENST00000611877 1162 ntBASIC15.42■□□□□ 0.06
SLC6A4P31645 AC005695.3-201ENST00000614522 232 ntBASIC15.42■□□□□ 0.06
SLC6A4P31645 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC6A4P31645 AL096828.3-201ENST00000615354 462 ntBASIC15.42■□□□□ 0.06
SLC6A4P31645 AP001002.3-201ENST00000623482 206 ntBASIC15.42■□□□□ 0.06
SLC6A4P31645 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A4P31645 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A4P31645 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC6A4P31645 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC6A4P31645 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A4P31645 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SLC6A4P31645 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A4P31645 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SLC6A4P31645 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 SALL4P5-201ENST00000419001 1760 ntBASIC15.41■□□□□ 0.06
SLC6A4P31645 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC6A4P31645 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC6A4P31645 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SLC6A4P31645 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SLC6A4P31645 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.41■□□□□ 0.06
SLC6A4P31645 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.41■□□□□ 0.06
SLC6A4P31645 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 HSPB1P2-201ENST00000448722 546 ntBASIC15.41■□□□□ 0.06
SLC6A4P31645 AL591846.1-201ENST00000451736 433 ntBASIC15.41■□□□□ 0.06
SLC6A4P31645 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC6A4P31645 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC6A4P31645 AC002472.3-201ENST00000640124 621 ntBASIC15.41■□□□□ 0.06
SLC6A4P31645 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC6A4P31645 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC6A4P31645 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC6A4P31645 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC6A4P31645 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC6A4P31645 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SLC6A4P31645 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A4P31645 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC6A4P31645 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC6A4P31645 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A4P31645 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC6A4P31645 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms