Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA13P31271 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA13P31271 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA13P31271 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA13P31271 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HOXA13P31271 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 MIR663B-201ENST00000408361 115 ntBASIC17.1■□□□□ 0.33
HOXA13P31271 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.1■□□□□ 0.33
HOXA13P31271 AC006033.1-201ENST00000440505 426 ntBASIC17.1■□□□□ 0.33
HOXA13P31271 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 AC005730.2-201ENST00000564549 1184 ntBASIC17.1■□□□□ 0.33
HOXA13P31271 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.1■□□□□ 0.33
HOXA13P31271 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 MIR3615-201ENST00000581999 87 ntBASIC17.1■□□□□ 0.33
HOXA13P31271 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 AL022328.3-201ENST00000607943 679 ntBASIC17.1■□□□□ 0.33
HOXA13P31271 AC002472.3-201ENST00000640124 621 ntBASIC17.1■□□□□ 0.33
HOXA13P31271 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HOXA13P31271 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXA13P31271 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOXA13P31271 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA13P31271 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 AC023157.3-201ENST00000619086 2088 ntBASIC17.09■□□□□ 0.33
HOXA13P31271 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXA13P31271 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXA13P31271 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HOXA13P31271 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXA13P31271 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HOXA13P31271 CICP23-201ENST00000605013 2741 ntBASIC17.09■□□□□ 0.33
HOXA13P31271 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HOXA13P31271 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXA13P31271 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.09■□□□□ 0.33
HOXA13P31271 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HOXA13P31271 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXA13P31271 MIR1247-201ENST00000408206 136 ntBASIC17.09■□□□□ 0.33
HOXA13P31271 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXA13P31271 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXA13P31271 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXA13P31271 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 AL136301.1-201ENST00000615830 422 ntBASIC17.09■□□□□ 0.33
HOXA13P31271 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXA13P31271 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXA13P31271 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXA13P31271 SALL4P5-201ENST00000419001 1760 ntBASIC17.09■□□□□ 0.33
HOXA13P31271 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXA13P31271 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms