Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMLP26374 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHMLP26374 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHMLP26374 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHMLP26374 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CHMLP26374 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMLP26374 AC022447.6-201ENST00000515522 438 ntBASIC18.12■□□□□ 0.49
CHMLP26374 TDH-203ENST00000531764 1110 ntBASIC18.12■□□□□ 0.49
CHMLP26374 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMLP26374 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMLP26374 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMLP26374 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMLP26374 AC025048.6-201ENST00000634326 1161 ntBASIC18.12■□□□□ 0.49
CHMLP26374 CLUHP2-201ENST00000426660 1303 ntBASIC18.12■□□□□ 0.49
CHMLP26374 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHMLP26374 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHMLP26374 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMLP26374 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 INE2-201ENST00000630399 1874 ntBASIC18.12■□□□□ 0.49
CHMLP26374 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHMLP26374 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 AC027601.5-201ENST00000624065 2482 ntBASIC18.11■□□□□ 0.49
CHMLP26374 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMLP26374 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMLP26374 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMLP26374 AP006294.1-201ENST00000415407 339 ntBASIC18.11■□□□□ 0.49
CHMLP26374 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMLP26374 RN7SL837P-201ENST00000463010 287 ntBASIC18.11■□□□□ 0.49
CHMLP26374 AC106760.1-201ENST00000508690 800 ntBASIC18.11■□□□□ 0.49
CHMLP26374 AC068587.3-201ENST00000526613 355 ntBASIC18.11■□□□□ 0.49
CHMLP26374 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHMLP26374 AC068587.6-202ENST00000641839 5619 ntBASIC18.11■□□□□ 0.49
CHMLP26374 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMLP26374 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHMLP26374 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMLP26374 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMLP26374 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
CHMLP26374 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CHMLP26374 HSPA7-201ENST00000445535 1927 ntBASIC18.1■□□□□ 0.49
CHMLP26374 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMLP26374 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHMLP26374 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.1■□□□□ 0.49
CHMLP26374 MESTP3-201ENST00000503460 968 ntBASIC18.1■□□□□ 0.49
CHMLP26374 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 AP001889.1-201ENST00000525414 633 ntBASIC18.1■□□□□ 0.49
CHMLP26374 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 AC131206.1-201ENST00000538078 1211 ntBASIC18.1■□□□□ 0.49
CHMLP26374 PTP4A1P2-201ENST00000546033 454 ntBASIC18.1■□□□□ 0.49
CHMLP26374 GNRHR2-203ENST00000581100 1187 ntBASIC18.1■□□□□ 0.49
CHMLP26374 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms