Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
COL8A2P25067 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.75□□□□□ -0.37
COL8A2P25067 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.75□□□□□ -0.37
COL8A2P25067 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.75□□□□□ -0.37
COL8A2P25067 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
COL8A2P25067 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.75□□□□□ -0.37
COL8A2P25067 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.75□□□□□ -0.37
COL8A2P25067 GOLGA2P4-201ENST00000441462 777 ntBASIC12.75□□□□□ -0.37
COL8A2P25067 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.75□□□□□ -0.37
COL8A2P25067 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.75□□□□□ -0.37
COL8A2P25067 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.75□□□□□ -0.37
COL8A2P25067 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
COL8A2P25067 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.75□□□□□ -0.37
COL8A2P25067 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 AC026434.2-201ENST00000506094 1078 ntBASIC12.75□□□□□ -0.37
COL8A2P25067 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
COL8A2P25067 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.75□□□□□ -0.37
COL8A2P25067 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
COL8A2P25067 FAM8A2P-201ENST00000528813 1142 ntBASIC12.75□□□□□ -0.37
COL8A2P25067 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.75□□□□□ -0.37
COL8A2P25067 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
COL8A2P25067 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.75□□□□□ -0.37
COL8A2P25067 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
COL8A2P25067 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.75□□□□□ -0.37
COL8A2P25067 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
COL8A2P25067 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.75□□□□□ -0.37
COL8A2P25067 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.75□□□□□ -0.37
COL8A2P25067 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.75□□□□□ -0.37
COL8A2P25067 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.75□□□□□ -0.37
COL8A2P25067 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
COL8A2P25067 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 AL137783.1-201ENST00000623494 1896 ntBASIC12.75□□□□□ -0.37
COL8A2P25067 AC022532.1-201ENST00000624563 1728 ntBASIC12.75□□□□□ -0.37
COL8A2P25067 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
COL8A2P25067 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
COL8A2P25067 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
COL8A2P25067 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.75□□□□□ -0.37
COL8A2P25067 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COL8A2P25067 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 TMBIM7P-203ENST00000641617 1718 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 AC138035.3-201ENST00000622706 2791 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 BTBD6P1-201ENST00000412176 1267 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 CNN2P10-201ENST00000443067 918 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 AL391280.1-201ENST00000506969 1062 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 COX5BP1-201ENST00000507622 393 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms