Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.89□□□□□ -0.03
CDH3P22223 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CDH3P22223 SLC25A47P1-201ENST00000531577 414 ntBASIC14.89□□□□□ -0.03
CDH3P22223 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.89□□□□□ -0.03
CDH3P22223 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH3P22223 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.89□□□□□ -0.03
CDH3P22223 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.89□□□□□ -0.03
CDH3P22223 CLUHP6-201ENST00000580789 941 ntBASIC14.89□□□□□ -0.03
CDH3P22223 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.89□□□□□ -0.03
CDH3P22223 BTNL10-201ENST00000595971 695 ntBASIC14.89□□□□□ -0.03
CDH3P22223 AC233724.13-201ENST00000598383 410 ntBASIC14.89□□□□□ -0.03
CDH3P22223 RPSAP52-203ENST00000622976 1023 ntBASIC14.89□□□□□ -0.03
CDH3P22223 AC005252.2-201ENST00000624630 1141 ntBASIC14.89□□□□□ -0.03
CDH3P22223 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 AC084364.1-201ENST00000551967 1556 ntBASIC14.89□□□□□ -0.03
CDH3P22223 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDH3P22223 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH3P22223 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH3P22223 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDH3P22223 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH3P22223 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH3P22223 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH3P22223 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH3P22223 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 AC018665.1-201ENST00000622927 1362 ntBASIC14.88□□□□□ -0.03
CDH3P22223 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDH3P22223 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH3P22223 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CDH3P22223 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.88□□□□□ -0.03
CDH3P22223 ARSEP1-201ENST00000420443 635 ntBASIC14.88□□□□□ -0.03
CDH3P22223 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.88□□□□□ -0.03
CDH3P22223 USP32P1-208ENST00000506594 1164 ntBASIC14.88□□□□□ -0.03
CDH3P22223 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.88□□□□□ -0.03
CDH3P22223 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH3P22223 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CDH3P22223 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH3P22223 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH3P22223 AL008721.1-201ENST00000609964 604 ntBASIC14.88□□□□□ -0.03
CDH3P22223 AL022328.1-201ENST00000610050 478 ntBASIC14.88□□□□□ -0.03
CDH3P22223 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH3P22223 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH3P22223 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 AC126335.2-201ENST00000623362 4637 ntBASIC14.88□□□□□ -0.03
CDH3P22223 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.88□□□□□ -0.03
CDH3P22223 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH3P22223 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH3P22223 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH3P22223 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH3P22223 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH3P22223 AL138799.1-201ENST00000448213 1675 ntBASIC14.87□□□□□ -0.03
CDH3P22223 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CDH3P22223 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms