Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
SYN1P17600 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SYN1P17600 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
SYN1P17600 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
SYN1P17600 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
SYN1P17600 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
SYN1P17600 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SYN1P17600 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.15■□□□□ 0.18
SYN1P17600 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.15■□□□□ 0.18
SYN1P17600 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.15■□□□□ 0.18
SYN1P17600 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 AC138701.2-201ENST00000553634 226 ntBASIC16.15■□□□□ 0.18
SYN1P17600 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.15■□□□□ 0.18
SYN1P17600 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.15■□□□□ 0.18
SYN1P17600 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.15■□□□□ 0.18
SYN1P17600 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.15■□□□□ 0.18
SYN1P17600 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 LINC01815-202ENST00000641468 1409 ntBASIC16.15■□□□□ 0.18
SYN1P17600 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.15■□□□□ 0.18
SYN1P17600 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.15■□□□□ 0.18
SYN1P17600 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SYN1P17600 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SYN1P17600 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SYN1P17600 AC021305.1-201ENST00000520656 1514 ntBASIC16.14■□□□□ 0.18
SYN1P17600 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.14■□□□□ 0.17
SYN1P17600 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.14■□□□□ 0.17
SYN1P17600 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.14■□□□□ 0.17
SYN1P17600 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.14■□□□□ 0.17
SYN1P17600 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.14■□□□□ 0.17
SYN1P17600 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SYN1P17600 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SYN1P17600 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SYN1P17600 GUSBP10-201ENST00000417412 665 ntBASIC16.14■□□□□ 0.17
SYN1P17600 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.14■□□□□ 0.17
SYN1P17600 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.14■□□□□ 0.17
SYN1P17600 XBP1P1-201ENST00000436573 652 ntBASIC16.14■□□□□ 0.17
SYN1P17600 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.14■□□□□ 0.17
SYN1P17600 DUX4L50-201ENST00000455245 715 ntBASIC16.14■□□□□ 0.17
SYN1P17600 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.14■□□□□ 0.17
SYN1P17600 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.14■□□□□ 0.17
SYN1P17600 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.14■□□□□ 0.17
SYN1P17600 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.14■□□□□ 0.17
SYN1P17600 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.14■□□□□ 0.17
SYN1P17600 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.14■□□□□ 0.17
SYN1P17600 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 ENPP7P8-202ENST00000527856 1345 ntBASIC16.14■□□□□ 0.17
SYN1P17600 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SYN1P17600 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.14■□□□□ 0.17
SYN1P17600 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYN1P17600 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
SYN1P17600 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SYN1P17600 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.13■□□□□ 0.17
SYN1P17600 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SYN1P17600 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 MIR566-201ENST00000385187 94 ntBASIC16.13■□□□□ 0.17
SYN1P17600 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SYN1P17600 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 AC023141.7-201ENST00000430646 407 ntBASIC16.13■□□□□ 0.17
SYN1P17600 RN7SL494P-201ENST00000461517 304 ntBASIC16.13■□□□□ 0.17
SYN1P17600 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SYN1P17600 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms