Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC026434.2-201ENST00000506094 1078 ntBASIC12.48□□□□□ -0.41
CCL3L1P16619 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL3L1P16619 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.48□□□□□ -0.41
CCL3L1P16619 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL3L1P16619 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.48□□□□□ -0.41
CCL3L1P16619 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCL3L1P16619 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL3L1P16619 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CCL3L1P16619 CICP24-201ENST00000605464 2705 ntBASIC12.47□□□□□ -0.41
CCL3L1P16619 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL3L1P16619 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CCL3L1P16619 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL3L1P16619 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CCL3L1P16619 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CCL3L1P16619 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL3L1P16619 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL3L1P16619 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.47□□□□□ -0.41
CCL3L1P16619 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL3L1P16619 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL3L1P16619 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL3L1P16619 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL3L1P16619 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
CCL3L1P16619 DUX4L47-201ENST00000566374 394 ntBASIC12.47□□□□□ -0.41
CCL3L1P16619 BTNL10-201ENST00000595971 695 ntBASIC12.47□□□□□ -0.41
CCL3L1P16619 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL3L1P16619 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
CCL3L1P16619 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 AL365209.1-201ENST00000624418 6473 ntBASIC12.47□□□□□ -0.41
CCL3L1P16619 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL3L1P16619 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
CCL3L1P16619 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CCL3L1P16619 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL3L1P16619 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL3L1P16619 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL3L1P16619 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 AC023090.2-201ENST00000625182 2110 ntBASIC12.46□□□□□ -0.41
CCL3L1P16619 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 FGD5P1-202ENST00000614866 2498 ntBASIC12.46□□□□□ -0.41
CCL3L1P16619 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms