Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.22■□□□□ 0.03
THRAP10827 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
THRAP10827 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.22■□□□□ 0.03
THRAP10827 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.22■□□□□ 0.03
THRAP10827 AL442647.2-201ENST00000429864 857 ntBASIC15.22■□□□□ 0.03
THRAP10827 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.22■□□□□ 0.03
THRAP10827 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.22■□□□□ 0.03
THRAP10827 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.22■□□□□ 0.03
THRAP10827 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.22■□□□□ 0.03
THRAP10827 AC015936.2-201ENST00000593177 259 ntBASIC15.22■□□□□ 0.03
THRAP10827 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.22■□□□□ 0.03
THRAP10827 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.22■□□□□ 0.03
THRAP10827 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
THRAP10827 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
THRAP10827 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
THRAP10827 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.22■□□□□ 0.03
THRAP10827 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THRAP10827 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
THRAP10827 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.21■□□□□ 0.03
THRAP10827 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
THRAP10827 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
THRAP10827 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.21■□□□□ 0.03
THRAP10827 AC008735.3-201ENST00000596646 500 ntBASIC15.21■□□□□ 0.03
THRAP10827 AC010319.3-201ENST00000597028 470 ntBASIC15.21■□□□□ 0.03
THRAP10827 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
THRAP10827 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.21■□□□□ 0.03
THRAP10827 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
THRAP10827 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
THRAP10827 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THRAP10827 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.21■□□□□ 0.03
THRAP10827 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
THRAP10827 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.21■□□□□ 0.02
THRAP10827 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
THRAP10827 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
THRAP10827 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
THRAP10827 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THRAP10827 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
THRAP10827 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THRAP10827 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
THRAP10827 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
THRAP10827 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.21■□□□□ 0.02
THRAP10827 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THRAP10827 AC079781.5-202ENST00000641784 3743 ntBASIC15.2■□□□□ 0.02
THRAP10827 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms