Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 AC018845.2-201ENST00000568326 409 ntBASIC11.34□□□□□ -0.59
SMIM17P0DL12 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 AC027307.2-201ENST00000591252 911 ntBASIC11.34□□□□□ -0.59
SMIM17P0DL12 AC064836.3-201ENST00000607928 673 ntBASIC11.34□□□□□ -0.59
SMIM17P0DL12 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 AC008267.7-201ENST00000624570 1194 ntBASIC11.34□□□□□ -0.59
SMIM17P0DL12 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.34□□□□□ -0.59
SMIM17P0DL12 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMIM17P0DL12 POM121L4P-202ENST00000427789 1891 ntBASIC11.34□□□□□ -0.59
SMIM17P0DL12 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.33□□□□□ -0.59
SMIM17P0DL12 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
SMIM17P0DL12 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.33□□□□□ -0.59
SMIM17P0DL12 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
SMIM17P0DL12 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 AL136982.4-201ENST00000437689 1740 ntBASIC11.33□□□□□ -0.6
SMIM17P0DL12 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 FAM220BP-201ENST00000377689 816 ntBASIC11.33□□□□□ -0.6
SMIM17P0DL12 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 RN7SL589P-201ENST00000481268 310 ntBASIC11.33□□□□□ -0.6
SMIM17P0DL12 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 IGHV3-62-201ENST00000520057 340 ntBASIC11.33□□□□□ -0.6
SMIM17P0DL12 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 AL138918.1-201ENST00000568306 659 ntBASIC11.33□□□□□ -0.6
SMIM17P0DL12 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 AL049840.3-201ENST00000602669 611 ntBASIC11.33□□□□□ -0.6
SMIM17P0DL12 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM17P0DL12 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SMIM17P0DL12 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms