Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.85■□□□□ 0.29
HOXC6P09630 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.85■□□□□ 0.29
HOXC6P09630 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.85■□□□□ 0.29
HOXC6P09630 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HOXC6P09630 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HOXC6P09630 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HOXC6P09630 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
HOXC6P09630 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.85■□□□□ 0.29
HOXC6P09630 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.85■□□□□ 0.29
HOXC6P09630 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.85■□□□□ 0.29
HOXC6P09630 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.85■□□□□ 0.29
HOXC6P09630 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.85■□□□□ 0.29
HOXC6P09630 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.85■□□□□ 0.29
HOXC6P09630 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 AC027601.3-201ENST00000622907 509 ntBASIC16.85■□□□□ 0.29
HOXC6P09630 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HOXC6P09630 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.85■□□□□ 0.29
HOXC6P09630 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.85■□□□□ 0.29
HOXC6P09630 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC6P09630 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC6P09630 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
HOXC6P09630 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 AL645933.1-201ENST00000440087 609 ntBASIC16.84■□□□□ 0.29
HOXC6P09630 CICP12-201ENST00000455801 843 ntBASIC16.84■□□□□ 0.29
HOXC6P09630 RN7SL8P-201ENST00000461771 266 ntBASIC16.84■□□□□ 0.29
HOXC6P09630 AC006122.1-201ENST00000493323 440 ntBASIC16.84■□□□□ 0.29
HOXC6P09630 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC6P09630 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
HOXC6P09630 AC135983.4-201ENST00000564116 1262 ntBASIC16.84■□□□□ 0.29
HOXC6P09630 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.84■□□□□ 0.29
HOXC6P09630 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC6P09630 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC6P09630 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HOXC6P09630 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 AC144522.1-201ENST00000625111 1658 ntBASIC16.84■□□□□ 0.29
HOXC6P09630 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HOXC6P09630 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC6P09630 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC6P09630 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.83■□□□□ 0.29
HOXC6P09630 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXC6P09630 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXC6P09630 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXC6P09630 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXC6P09630 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC6P09630 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.83■□□□□ 0.28
HOXC6P09630 AC026320.2-201ENST00000434379 478 ntBASIC16.83■□□□□ 0.28
HOXC6P09630 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 AL035414.1-201ENST00000451327 857 ntBASIC16.83■□□□□ 0.28
HOXC6P09630 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms