Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.52□□□□□ -0.25
SPARCP09486 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPARCP09486 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPARCP09486 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SPARCP09486 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.52□□□□□ -0.25
SPARCP09486 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPARCP09486 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPARCP09486 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPARCP09486 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPARCP09486 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPARCP09486 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPARCP09486 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPARCP09486 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SPARCP09486 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SPARCP09486 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 CICP4-201ENST00000447359 2812 ntBASIC13.51□□□□□ -0.25
SPARCP09486 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SPARCP09486 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.51□□□□□ -0.25
SPARCP09486 AC018442.1-201ENST00000421439 2061 ntBASIC13.51□□□□□ -0.25
SPARCP09486 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.51□□□□□ -0.25
SPARCP09486 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
SPARCP09486 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.51□□□□□ -0.25
SPARCP09486 AC114501.2-201ENST00000439631 535 ntBASIC13.51□□□□□ -0.25
SPARCP09486 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.51□□□□□ -0.25
SPARCP09486 MEIS3P1-201ENST00000495167 958 ntBASIC13.51□□□□□ -0.25
SPARCP09486 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.51□□□□□ -0.25
SPARCP09486 AC092337.1-201ENST00000568699 1129 ntBASIC13.51□□□□□ -0.25
SPARCP09486 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.51□□□□□ -0.25
SPARCP09486 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SPARCP09486 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
SPARCP09486 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SPARCP09486 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SPARCP09486 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SPARCP09486 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.51□□□□□ -0.25
SPARCP09486 AL731571.1-201ENST00000617058 5428 ntBASIC13.51□□□□□ -0.25
SPARCP09486 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPARCP09486 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SPARCP09486 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SPARCP09486 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.5□□□□□ -0.25
SPARCP09486 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SPARCP09486 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.5□□□□□ -0.25
SPARCP09486 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.5□□□□□ -0.25
SPARCP09486 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.5□□□□□ -0.25
SPARCP09486 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SPARCP09486 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.5□□□□□ -0.25
SPARCP09486 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SPARCP09486 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
SPARCP09486 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SPARCP09486 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SPARCP09486 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.5□□□□□ -0.25
SPARCP09486 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms