Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.23□□□□□ -0.29
SFTPBP07988 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SFTPBP07988 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.22□□□□□ -0.29
SFTPBP07988 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.22□□□□□ -0.29
SFTPBP07988 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
SFTPBP07988 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.22□□□□□ -0.29
SFTPBP07988 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.22□□□□□ -0.29
SFTPBP07988 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.22□□□□□ -0.29
SFTPBP07988 AL035633.1-201ENST00000406139 838 ntBASIC13.22□□□□□ -0.29
SFTPBP07988 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.22□□□□□ -0.29
SFTPBP07988 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.22□□□□□ -0.29
SFTPBP07988 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 SERBP1P3-201ENST00000459980 809 ntBASIC13.22□□□□□ -0.29
SFTPBP07988 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.22□□□□□ -0.29
SFTPBP07988 TERF1P3-201ENST00000505638 1227 ntBASIC13.22□□□□□ -0.29
SFTPBP07988 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.22□□□□□ -0.29
SFTPBP07988 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.22□□□□□ -0.29
SFTPBP07988 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.22□□□□□ -0.29
SFTPBP07988 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.22□□□□□ -0.29
SFTPBP07988 AC025048.3-201ENST00000590609 569 ntBASIC13.22□□□□□ -0.29
SFTPBP07988 LINC02560-201ENST00000596379 459 ntBASIC13.22□□□□□ -0.29
SFTPBP07988 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 AL844908.2-201ENST00000609461 460 ntBASIC13.22□□□□□ -0.29
SFTPBP07988 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
SFTPBP07988 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.22□□□□□ -0.29
SFTPBP07988 AC005702.4-201ENST00000618393 416 ntBASIC13.22□□□□□ -0.29
SFTPBP07988 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 AC005840.4-201ENST00000541242 2494 ntBASIC13.22□□□□□ -0.29
SFTPBP07988 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.22□□□□□ -0.29
SFTPBP07988 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.22□□□□□ -0.29
SFTPBP07988 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SFTPBP07988 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SFTPBP07988 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.21□□□□□ -0.29
SFTPBP07988 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.21□□□□□ -0.29
SFTPBP07988 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.21□□□□□ -0.29
SFTPBP07988 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.21□□□□□ -0.29
SFTPBP07988 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.21□□□□□ -0.29
SFTPBP07988 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.21□□□□□ -0.29
SFTPBP07988 AC087499.5-201ENST00000452760 1342 ntBASIC13.21□□□□□ -0.29
SFTPBP07988 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.21□□□□□ -0.29
SFTPBP07988 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.21□□□□□ -0.29
SFTPBP07988 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.21□□□□□ -0.29
SFTPBP07988 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.21□□□□□ -0.29
SFTPBP07988 SERBP1P5-201ENST00000510079 1181 ntBASIC13.21□□□□□ -0.29
SFTPBP07988 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms