Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 HIST2H2BB-201ENST00000449108 381 ntBASIC18.04■□□□□ 0.48
CHGBP05060 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.04■□□□□ 0.48
CHGBP05060 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.04■□□□□ 0.48
CHGBP05060 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.04■□□□□ 0.48
CHGBP05060 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHGBP05060 PPY2P-201ENST00000582808 702 ntBASIC18.04■□□□□ 0.48
CHGBP05060 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.04■□□□□ 0.48
CHGBP05060 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.04■□□□□ 0.48
CHGBP05060 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CHGBP05060 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHGBP05060 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.04■□□□□ 0.48
CHGBP05060 SALL4P5-201ENST00000419001 1760 ntBASIC18.04■□□□□ 0.48
CHGBP05060 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CHGBP05060 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.04■□□□□ 0.48
CHGBP05060 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHGBP05060 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.04■□□□□ 0.48
CHGBP05060 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHGBP05060 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHGBP05060 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.03■□□□□ 0.48
CHGBP05060 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHGBP05060 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.03■□□□□ 0.48
CHGBP05060 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.03■□□□□ 0.48
CHGBP05060 GOLGA2P4-201ENST00000441462 777 ntBASIC18.03■□□□□ 0.48
CHGBP05060 DUX4L45-201ENST00000566406 1057 ntBASIC18.03■□□□□ 0.48
CHGBP05060 MIR4538-201ENST00000581377 78 ntBASIC18.03■□□□□ 0.48
CHGBP05060 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.03■□□□□ 0.48
CHGBP05060 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.03■□□□□ 0.48
CHGBP05060 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.03■□□□□ 0.48
CHGBP05060 AL358472.3-201ENST00000608147 415 ntBASIC18.03■□□□□ 0.48
CHGBP05060 MIR6752-201ENST00000618442 71 ntBASIC18.03■□□□□ 0.48
CHGBP05060 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.03■□□□□ 0.48
CHGBP05060 AL603764.1-201ENST00000636452 321 ntBASIC18.03■□□□□ 0.48
CHGBP05060 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 AP000593.2-201ENST00000542775 1433 ntBASIC18.03■□□□□ 0.48
CHGBP05060 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHGBP05060 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.03■□□□□ 0.48
CHGBP05060 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CHGBP05060 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CHGBP05060 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHGBP05060 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.03■□□□□ 0.48
CHGBP05060 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CHGBP05060 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHGBP05060 AP001267.2-201ENST00000532619 2086 ntBASIC18.02■□□□□ 0.48
CHGBP05060 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
CHGBP05060 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 MIR326-201ENST00000362220 95 ntBASIC18.02■□□□□ 0.48
CHGBP05060 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.02■□□□□ 0.48
CHGBP05060 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.02■□□□□ 0.48
CHGBP05060 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 FAM86HP-204ENST00000513466 959 ntBASIC18.02■□□□□ 0.48
CHGBP05060 RNA5SP412-201ENST00000516234 123 ntBASIC18.02■□□□□ 0.48
CHGBP05060 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.02■□□□□ 0.48
CHGBP05060 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHGBP05060 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.02■□□□□ 0.48
CHGBP05060 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.02■□□□□ 0.48
CHGBP05060 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.02■□□□□ 0.48
CHGBP05060 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.02■□□□□ 0.47
CHGBP05060 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHGBP05060 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHGBP05060 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.02■□□□□ 0.47
CHGBP05060 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.01■□□□□ 0.47
CHGBP05060 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.01■□□□□ 0.47
CHGBP05060 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms