Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-AP01891 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-AP01891 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-AP01891 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-AP01891 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-AP01891 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
HLA-AP01891 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-AP01891 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 AC074386.1-202ENST00000463561 864 ntBASIC12.82□□□□□ -0.36
HLA-AP01891 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 RNA5SP410-201ENST00000516285 106 ntBASIC12.82□□□□□ -0.36
HLA-AP01891 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.82□□□□□ -0.36
HLA-AP01891 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-AP01891 AC073389.1-201ENST00000595595 795 ntBASIC12.82□□□□□ -0.36
HLA-AP01891 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 AL161645.1-201ENST00000622716 1255 ntBASIC12.82□□□□□ -0.36
HLA-AP01891 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HLA-AP01891 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HLA-AP01891 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.82□□□□□ -0.36
HLA-AP01891 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-AP01891 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-AP01891 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-AP01891 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
HLA-AP01891 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-AP01891 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
HLA-AP01891 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-AP01891 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HLA-AP01891 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-AP01891 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HLA-AP01891 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-AP01891 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-AP01891 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.81□□□□□ -0.36
HLA-AP01891 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-AP01891 PGAM5P1-201ENST00000518923 814 ntBASIC12.81□□□□□ -0.36
HLA-AP01891 AC105233.2-201ENST00000523697 349 ntBASIC12.81□□□□□ -0.36
HLA-AP01891 AF228730.5-201ENST00000530288 346 ntBASIC12.81□□□□□ -0.36
HLA-AP01891 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.81□□□□□ -0.36
HLA-AP01891 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-AP01891 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-AP01891 AC068137.2-201ENST00000605408 478 ntBASIC12.81□□□□□ -0.36
HLA-AP01891 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.81□□□□□ -0.36
HLA-AP01891 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms