Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.15□□□□□ -0.3
UPK1BO75841 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.15□□□□□ -0.3
UPK1BO75841 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK1BO75841 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK1BO75841 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.15□□□□□ -0.3
UPK1BO75841 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UPK1BO75841 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 SNORA78-201ENST00000459373 127 ntBASIC13.15□□□□□ -0.3
UPK1BO75841 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 PRYP6-201ENST00000514804 343 ntBASIC13.15□□□□□ -0.3
UPK1BO75841 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.15□□□□□ -0.3
UPK1BO75841 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK1BO75841 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.15□□□□□ -0.3
UPK1BO75841 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK1BO75841 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK1BO75841 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 TRIM80P-201ENST00000455685 2848 ntBASIC13.15□□□□□ -0.3
UPK1BO75841 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK1BO75841 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
UPK1BO75841 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.15□□□□□ -0.31
UPK1BO75841 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK1BO75841 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
UPK1BO75841 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UPK1BO75841 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
UPK1BO75841 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK1BO75841 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UPK1BO75841 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
UPK1BO75841 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UPK1BO75841 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK1BO75841 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
UPK1BO75841 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.14□□□□□ -0.31
UPK1BO75841 AC136604.1-202ENST00000425471 771 ntBASIC13.14□□□□□ -0.31
UPK1BO75841 DUSP5P1-201ENST00000441325 1139 ntBASIC13.14□□□□□ -0.31
UPK1BO75841 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UPK1BO75841 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK1BO75841 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.14□□□□□ -0.31
UPK1BO75841 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.14□□□□□ -0.31
UPK1BO75841 AL031432.2-201ENST00000566714 459 ntBASIC13.14□□□□□ -0.31
UPK1BO75841 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 AL928711.1-201ENST00000570165 459 ntBASIC13.14□□□□□ -0.31
UPK1BO75841 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK1BO75841 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 AC145285.6-201ENST00000604632 637 ntBASIC13.14□□□□□ -0.31
UPK1BO75841 AL121672.3-201ENST00000608644 468 ntBASIC13.14□□□□□ -0.31
UPK1BO75841 AL645728.2-201ENST00000641974 660 ntBASIC13.14□□□□□ -0.31
UPK1BO75841 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.14□□□□□ -0.31
UPK1BO75841 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK1BO75841 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.14□□□□□ -0.31
UPK1BO75841 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK1BO75841 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK1BO75841 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
UPK1BO75841 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
UPK1BO75841 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.13□□□□□ -0.31
UPK1BO75841 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
UPK1BO75841 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
UPK1BO75841 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK1BO75841 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
UPK1BO75841 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.13□□□□□ -0.31
UPK1BO75841 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.13□□□□□ -0.31
UPK1BO75841 AC109635.5-201ENST00000533593 962 ntBASIC13.13□□□□□ -0.31
UPK1BO75841 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK1BO75841 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms