Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
SMARCA5O60264 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCA5O60264 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SMARCA5O60264 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCA5O60264 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCA5O60264 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.59■□□□□ 0.57
SMARCA5O60264 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.59■□□□□ 0.57
SMARCA5O60264 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.59■□□□□ 0.57
SMARCA5O60264 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCA5O60264 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SMARCA5O60264 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
SMARCA5O60264 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.59■□□□□ 0.57
SMARCA5O60264 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCA5O60264 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCA5O60264 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCA5O60264 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.58■□□□□ 0.57
SMARCA5O60264 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.58■□□□□ 0.57
SMARCA5O60264 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCA5O60264 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SMARCA5O60264 CU639417.3-201ENST00000624240 1404 ntBASIC18.58■□□□□ 0.57
SMARCA5O60264 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SMARCA5O60264 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.58■□□□□ 0.57
SMARCA5O60264 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCA5O60264 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.58■□□□□ 0.57
SMARCA5O60264 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.58■□□□□ 0.57
SMARCA5O60264 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SMARCA5O60264 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SMARCA5O60264 AC117489.1-201ENST00000625169 3217 ntBASIC18.58■□□□□ 0.57
SMARCA5O60264 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
SMARCA5O60264 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCA5O60264 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCA5O60264 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.58■□□□□ 0.56
SMARCA5O60264 AC092933.1-201ENST00000393644 945 ntBASIC18.58■□□□□ 0.56
SMARCA5O60264 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SMARCA5O60264 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.58■□□□□ 0.56
SMARCA5O60264 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.58■□□□□ 0.56
SMARCA5O60264 AC005225.4-201ENST00000557330 545 ntBASIC18.58■□□□□ 0.56
SMARCA5O60264 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.58■□□□□ 0.56
SMARCA5O60264 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.58■□□□□ 0.56
SMARCA5O60264 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.58■□□□□ 0.56
SMARCA5O60264 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.58■□□□□ 0.56
SMARCA5O60264 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.58■□□□□ 0.56
SMARCA5O60264 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SMARCA5O60264 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SMARCA5O60264 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.58■□□□□ 0.56
SMARCA5O60264 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.58■□□□□ 0.56
SMARCA5O60264 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SMARCA5O60264 AC007292.2-201ENST00000593524 1812 ntBASIC18.58■□□□□ 0.56
SMARCA5O60264 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCA5O60264 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.58■□□□□ 0.56
SMARCA5O60264 AC067930.6-201ENST00000623257 4947 ntBASIC18.57■□□□□ 0.56
SMARCA5O60264 AC007191.1-201ENST00000623179 2995 ntBASIC18.57■□□□□ 0.56
SMARCA5O60264 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
SMARCA5O60264 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SMARCA5O60264 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCA5O60264 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.57■□□□□ 0.56
SMARCA5O60264 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 AC026748.1-201ENST00000624349 3251 ntBASIC18.57■□□□□ 0.56
SMARCA5O60264 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SMARCA5O60264 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SMARCA5O60264 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCA5O60264 POM121L8P-201ENST00000417732 1281 ntBASIC18.57■□□□□ 0.56
SMARCA5O60264 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.57■□□□□ 0.56
SMARCA5O60264 POM121L9P-203ENST00000441984 1285 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms