Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 AC009145.4-201ENST00000625119 1294 ntBASIC15.75■□□□□ 0.11
SOX1O00570 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.75■□□□□ 0.11
SOX1O00570 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.75■□□□□ 0.11
SOX1O00570 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.75■□□□□ 0.11
SOX1O00570 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SOX1O00570 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SOX1O00570 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
SOX1O00570 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.75■□□□□ 0.11
SOX1O00570 MST1L-201ENST00000442552 2185 ntBASIC15.75■□□□□ 0.11
SOX1O00570 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.75■□□□□ 0.11
SOX1O00570 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.75■□□□□ 0.11
SOX1O00570 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.74■□□□□ 0.11
SOX1O00570 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.74■□□□□ 0.11
SOX1O00570 AC105020.1-201ENST00000435356 2205 ntBASIC15.74■□□□□ 0.11
SOX1O00570 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.74■□□□□ 0.11
SOX1O00570 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
SOX1O00570 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.74■□□□□ 0.11
SOX1O00570 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.74■□□□□ 0.11
SOX1O00570 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.74■□□□□ 0.11
SOX1O00570 AC113347.2-201ENST00000512350 279 ntBASIC15.74■□□□□ 0.11
SOX1O00570 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.74■□□□□ 0.11
SOX1O00570 AL022334.2-201ENST00000610000 484 ntBASIC15.74■□□□□ 0.11
SOX1O00570 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 AC027601.3-201ENST00000622907 509 ntBASIC15.74■□□□□ 0.11
SOX1O00570 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.74■□□□□ 0.11
SOX1O00570 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX1O00570 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX1O00570 AC084364.1-201ENST00000551967 1556 ntBASIC15.74■□□□□ 0.11
SOX1O00570 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.74■□□□□ 0.11
SOX1O00570 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
SOX1O00570 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC15.73■□□□□ 0.11
SOX1O00570 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SOX1O00570 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX1O00570 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
SOX1O00570 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.73■□□□□ 0.11
SOX1O00570 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC15.73■□□□□ 0.11
SOX1O00570 EEF1DP5-201ENST00000431410 772 ntBASIC15.73■□□□□ 0.11
SOX1O00570 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.73■□□□□ 0.11
SOX1O00570 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX1O00570 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX1O00570 RPL18AP8-201ENST00000486071 528 ntBASIC15.73■□□□□ 0.11
SOX1O00570 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.73■□□□□ 0.11
SOX1O00570 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX1O00570 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX1O00570 AC023968.2-201ENST00000560593 1049 ntBASIC15.73■□□□□ 0.11
SOX1O00570 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.73■□□□□ 0.11
SOX1O00570 AC124068.2-201ENST00000569473 1109 ntBASIC15.73■□□□□ 0.11
SOX1O00570 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC15.73■□□□□ 0.11
SOX1O00570 NF1P11-201ENST00000621292 1282 ntBASIC15.73■□□□□ 0.11
SOX1O00570 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC15.73■□□□□ 0.11
SOX1O00570 AP000769.1-203ENST00000637245 208 ntBASIC15.73■□□□□ 0.11
SOX1O00570 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX1O00570 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX1O00570 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms