Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP99D6REC4 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC15.16■□□□□ 0.02
CFAP99D6REC4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP99D6REC4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.16■□□□□ 0.02
CFAP99D6REC4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP99D6REC4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AL158070.2-201ENST00000623713 1621 ntBASIC15.15■□□□□ 0.02
CFAP99D6REC4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AC106881.1-201ENST00000605849 3329 ntBASIC15.15■□□□□ 0.02
CFAP99D6REC4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 KRT18P25-201ENST00000508931 1278 ntBASIC15.15■□□□□ 0.02
CFAP99D6REC4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AC121493.1-201ENST00000602316 450 ntBASIC15.15■□□□□ 0.02
CFAP99D6REC4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.15■□□□□ 0.02
CFAP99D6REC4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFAP99D6REC4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 ACKR1-201ENST00000368121 1240 ntBASIC15.14■□□□□ 0.01
CFAP99D6REC4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 AC114812.1-204ENST00000449669 728 ntBASIC15.14■□□□□ 0.01
CFAP99D6REC4 COX20P2-201ENST00000452636 358 ntBASIC15.14■□□□□ 0.01
CFAP99D6REC4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 AP005019.2-201ENST00000615104 511 ntBASIC15.14■□□□□ 0.01
CFAP99D6REC4 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CFAP99D6REC4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CFAP99D6REC4 CU639417.3-201ENST00000624240 1404 ntBASIC15.14■□□□□ 0.01
CFAP99D6REC4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms