Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 FUCA1P1-201ENST00000374476 1351 ntBASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 AC007292.2-201ENST00000593524 1812 ntBASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 AC011676.5-201ENST00000624864 2660 ntBASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM88BA6NKF7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 CCL25-202ENST00000315626 450 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 AC092570.1-201ENST00000414446 469 ntBASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 AC098934.1-203ENST00000442868 1262 ntBASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 AC010900.1-201ENST00000449849 1296 ntBASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 GCOM2-201ENST00000509133 1104 ntBASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 AC013553.1-201ENST00000560906 267 ntBASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 MIR6125-201ENST00000618986 96 ntBASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM88BA6NKF7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 SALL4P5-201ENST00000419001 1760 ntBASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 AC106827.1-201ENST00000366454 431 ntBASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 BCRP4-201ENST00000506079 804 ntBASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 IGHEP2-201ENST00000519308 1256 ntBASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM88BA6NKF7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms