Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LCHNA4D1U4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LCHNA4D1U4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LCHNA4D1U4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.04■□□□□ 0.16
LCHNA4D1U4 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.03■□□□□ 0.16
LCHNA4D1U4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 FAM90A2P-201ENST00000511144 1395 ntBASIC16.03■□□□□ 0.16
LCHNA4D1U4 FAM90A25P-201ENST00000528404 1395 ntBASIC16.03■□□□□ 0.16
LCHNA4D1U4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.03■□□□□ 0.16
LCHNA4D1U4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 AC078875.1-201ENST00000431907 724 ntBASIC16.03■□□□□ 0.16
LCHNA4D1U4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 DNM1P30-201ENST00000563586 452 ntBASIC16.03■□□□□ 0.16
LCHNA4D1U4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 RPL17P45-201ENST00000586289 509 ntBASIC16.03■□□□□ 0.16
LCHNA4D1U4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
LCHNA4D1U4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCHNA4D1U4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCHNA4D1U4 AC006058.4-201ENST00000624016 1670 ntBASIC16.02■□□□□ 0.16
LCHNA4D1U4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCHNA4D1U4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCHNA4D1U4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCHNA4D1U4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCHNA4D1U4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCHNA4D1U4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCHNA4D1U4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCHNA4D1U4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.02■□□□□ 0.16
LCHNA4D1U4 AC127024.7-201ENST00000625101 200 ntBASIC16.02■□□□□ 0.16
LCHNA4D1U4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCHNA4D1U4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCHNA4D1U4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LCHNA4D1U4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
LCHNA4D1U4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCHNA4D1U4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCHNA4D1U4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LCHNA4D1U4 CICP11-201ENST00000434745 2827 ntBASIC16.02■□□□□ 0.15
LCHNA4D1U4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LCHNA4D1U4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCHNA4D1U4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCHNA4D1U4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LCHNA4D1U4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LCHNA4D1U4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
LCHNA4D1U4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms