Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 AC099336.1-201ENST00000417053 1171 ntBASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 HLA-K-203ENST00000430151 1046 ntBASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 FO681548.1-201ENST00000455617 1132 ntBASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL4A3BPQ9Y5P4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL4A3BPQ9Y5P4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
COL4A3BPQ9Y5P4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 FAM45BP-202ENST00000592932 1624 ntBASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 CNN2P8-201ENST00000421872 913 ntBASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 HLA-V-201ENST00000429037 534 ntBASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 CSF2RBP1-201ENST00000447905 391 ntBASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 RHOXF1P1-202ENST00000635473 501 ntBASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL4A3BPQ9Y5P4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 KRT8P14-201ENST00000414254 1442 ntBASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 LRRC59-203ENST00000576448 1531 ntBASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms