Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AC027796.2-201ENST00000575326 344 ntBASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGA11Q9Y5H2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 AL391825.1-201ENST00000457671 1364 ntBASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
PCDHGA11Q9Y5H2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 AC005252.3-201ENST00000623855 2258 ntBASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 AC134915.1-201ENST00000426461 574 ntBASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 DFFBP1-201ENST00000433250 979 ntBASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 SPTLC1P1-201ENST00000447199 261 ntBASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 AC093726.1-201ENST00000608064 963 ntBASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 AL158070.2-201ENST00000623713 1621 ntBASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 INTS4P2-202ENST00000614726 2019 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms