Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 RNU1-114P-201ENST00000365297 166 ntBASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 AL645937.2-201ENST00000396808 931 ntBASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 AC079178.1-201ENST00000420915 656 ntBASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 CNN2P10-201ENST00000443067 918 ntBASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 AL096828.3-201ENST00000615354 462 ntBASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGA9Q9Y5G4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 AL662890.1-201ENST00000396818 632 ntBASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGA9Q9Y5G4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms