Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 BAATP1-201ENST00000412284 1225 ntBASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 AC026954.1-201ENST00000429771 1293 ntBASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 RPL13AP20-201ENST00000459725 609 ntBASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 ZNF767P-206ENST00000513792 565 ntBASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 AC134312.5-201ENST00000568031 1313 ntBASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 OR2I1P-209ENST00000641730 5365 ntBASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 MIR1247-201ENST00000408206 136 ntBASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 AL139099.5-201ENST00000635274 300 ntBASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 PRSS30P-206ENST00000641773 873 ntBASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 AL513477.1-201ENST00000602865 2407 ntBASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB1Q9Y5F3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AL359258.3-201ENST00000622910 2331 ntBASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AC004945.1-201ENST00000416738 983 ntBASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AC016694.1-201ENST00000434179 700 ntBASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AC012441.1-201ENST00000446669 685 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms