Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LEMD3Q9Y2U8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
LEMD3Q9Y2U8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LEMD3Q9Y2U8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 RPS2P36-201ENST00000456516 831 ntBASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 AC116345.2-201ENST00000512837 523 ntBASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 RTN3P1-201ENST00000536295 711 ntBASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 MIR4754-201ENST00000582477 89 ntBASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 AC008741.2-201ENST00000612792 3115 ntBASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LEMD3Q9Y2U8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 MIR33B-201ENST00000385104 96 ntBASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AC073150.1-201ENST00000450406 1084 ntBASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 MPRIPP1-201ENST00000452433 1089 ntBASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 CEP164P1-201ENST00000455142 418 ntBASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AC006122.1-201ENST00000493323 440 ntBASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 POU5F1P2-201ENST00000521750 823 ntBASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 SPCS2P2-201ENST00000603270 608 ntBASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AC012044.1-201ENST00000603431 297 ntBASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.1■□□□□ 0.49
LEMD3Q9Y2U8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms