Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RIMS3Q9UJD0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RIMS3Q9UJD0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RIMS3Q9UJD0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 GPS2P2-201ENST00000430745 888 ntBASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 MTND6P24-201ENST00000440466 518 ntBASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 DNAJB3-201ENST00000446806 729 ntBASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 YBX1P5-201ENST00000509441 847 ntBASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 MIR4469-201ENST00000583919 79 ntBASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 AC007967.4-201ENST00000614700 386 ntBASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 AL035456.1-201ENST00000456064 1369 ntBASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIMS3Q9UJD0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 SPDYE14P-201ENST00000442619 822 ntBASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AC026150.2-201ENST00000564693 1156 ntBASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AL645728.2-202ENST00000641679 227 ntBASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AC012617.1-204ENST00000586340 2305 ntBASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 FAM90A12P-201ENST00000519497 2375 ntBASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 FAM90A24P-201ENST00000520792 2369 ntBASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 AGGF1P1-201ENST00000509500 2073 ntBASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 CICP16-201ENST00000502609 2813 ntBASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIMS3Q9UJD0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIMS3Q9UJD0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIMS3Q9UJD0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms