Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 AC018442.1-201ENST00000421439 2061 ntBASIC18.89■□□□□ 0.61
SCN11AQ9UI33 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 MARK2P16-201ENST00000605714 1723 ntBASIC18.89■□□□□ 0.61
SCN11AQ9UI33 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AL512306.1-201ENST00000432698 848 ntBASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AC005041.3-201ENST00000606287 649 ntBASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AC015688.4-201ENST00000580780 1647 ntBASIC18.88■□□□□ 0.61
SCN11AQ9UI33 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AC130709.1-201ENST00000484779 1212 ntBASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 AC073911.3-201ENST00000624401 631 ntBASIC18.88■□□□□ 0.61
SCN11AQ9UI33 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN11AQ9UI33 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 AC073869.2-201ENST00000417338 1026 ntBASIC18.87■□□□□ 0.61
SCN11AQ9UI33 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 KRT8P1-201ENST00000557533 1207 ntBASIC18.87■□□□□ 0.61
SCN11AQ9UI33 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 MIR4750-201ENST00000584564 56 ntBASIC18.87■□□□□ 0.61
SCN11AQ9UI33 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 MIR6842-201ENST00000612539 65 ntBASIC18.87■□□□□ 0.61
SCN11AQ9UI33 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN11AQ9UI33 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 OR8T1P-201ENST00000421347 918 ntBASIC18.86■□□□□ 0.61
SCN11AQ9UI33 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 DNM1P30-201ENST00000563586 452 ntBASIC18.86■□□□□ 0.61
SCN11AQ9UI33 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms