Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 REXO1L2P-201ENST00000425429 2069 ntBASIC16.73■□□□□ 0.27
VTA1Q9NP79 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 AL157407.1-201ENST00000435784 904 ntBASIC16.73■□□□□ 0.27
VTA1Q9NP79 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.72■□□□□ 0.27
VTA1Q9NP79 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTA1Q9NP79 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.71■□□□□ 0.27
VTA1Q9NP79 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
VTA1Q9NP79 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.71■□□□□ 0.27
VTA1Q9NP79 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VTA1Q9NP79 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.71■□□□□ 0.27
VTA1Q9NP79 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTA1Q9NP79 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.71■□□□□ 0.27
VTA1Q9NP79 MIR33B-201ENST00000385104 96 ntBASIC16.71■□□□□ 0.27
VTA1Q9NP79 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VTA1Q9NP79 MPRIPP1-201ENST00000452433 1089 ntBASIC16.71■□□□□ 0.27
VTA1Q9NP79 RPS2P36-201ENST00000456516 831 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms