Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 GAPDHP40-201ENST00000505218 1006 ntBASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 AL844908.2-201ENST00000609461 460 ntBASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 AL360270.3-201ENST00000609118 1348 ntBASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 AP001267.2-201ENST00000532619 2086 ntBASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J3Q9H1A7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 AC136759.1-202ENST00000530858 2194 ntBASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.02□□□□□ -0.17
POLR2J3Q9H1A7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms