Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AL049734.1-201ENST00000422384 608 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 PTPN2P1-201ENST00000423212 1072 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AL139142.1-201ENST00000431459 677 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 RPS24P13-201ENST00000442520 397 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AL078599.2-201ENST00000457116 471 ntTSL 3 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 CDV3P1-201ENST00000471403 739 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC016546.1-201ENST00000473590 463 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 ACOT9-207ENST00000492081 683 ntTSL 3 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC112225.1-201ENST00000508230 297 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 ASB5-205ENST00000512254 1036 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 FAU-206ENST00000529259 1125 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC090398.1-201ENST00000562795 1179 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC142381.2-201ENST00000566120 298 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC135776.3-201ENST00000570988 427 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 TSPAN16-204ENST00000590327 997 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AL139246.5-201ENST00000606645 996 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC012640.3-201ENST00000607847 430 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AL135999.3-201ENST00000610501 812 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AL158209.2-201ENST00000619266 216 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 U4.1-201ENST00000620349 87 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC007342.8-201ENST00000623278 678 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC079228.1-201ENST00000624774 1049 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 ATXN7L1-201ENST00000318724 1470 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 ANXA13-202ENST00000419625 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 Z82206.1-201ENST00000424496 1322 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 CASC19-238ENST00000641523 1558 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AL032819.2-201ENST00000624543 2162 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 CDY7P-201ENST00000429883 1604 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AL031651.1-201ENST00000615357 1438 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 MTHFD2P5-201ENST00000320415 844 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 UBE2A-201ENST00000346330 718 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms