Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 AC244107.1-201ENST00000442033 332 ntBASIC15.57■□□□□ 0.08
RPRD1AQ96P16 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 AC079316.1-201ENST00000548397 411 ntBASIC15.57■□□□□ 0.08
RPRD1AQ96P16 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 AC004466.1-201ENST00000599515 1080 ntBASIC15.57■□□□□ 0.08
RPRD1AQ96P16 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 AL354989.2-201ENST00000435838 1540 ntBASIC15.57■□□□□ 0.08
RPRD1AQ96P16 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPRD1AQ96P16 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 AC006001.1-201ENST00000325130 474 ntBASIC15.56■□□□□ 0.08
RPRD1AQ96P16 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 POM121L8P-201ENST00000417732 1281 ntBASIC15.56■□□□□ 0.08
RPRD1AQ96P16 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 HLA-V-201ENST00000429037 534 ntBASIC15.56■□□□□ 0.08
RPRD1AQ96P16 AC026954.1-201ENST00000429771 1293 ntBASIC15.56■□□□□ 0.08
RPRD1AQ96P16 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 POM121L9P-203ENST00000441984 1285 ntBASIC15.56■□□□□ 0.08
RPRD1AQ96P16 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 AC006453.4-201ENST00000636949 1252 ntBASIC15.56■□□□□ 0.08
RPRD1AQ96P16 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RPRD1AQ96P16 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 AHCYP2-201ENST00000430630 1300 ntBASIC15.55■□□□□ 0.08
RPRD1AQ96P16 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPRD1AQ96P16 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms