Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 ACE3P-201ENST00000423435 1973 ntBASIC16.24■□□□□ 0.19
SNX27Q96L92 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.24■□□□□ 0.19
SNX27Q96L92 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.24■□□□□ 0.19
SNX27Q96L92 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.24■□□□□ 0.19
SNX27Q96L92 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 AC009093.2-202ENST00000620513 2079 ntBASIC16.24■□□□□ 0.19
SNX27Q96L92 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SNX27Q96L92 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.24■□□□□ 0.19
SNX27Q96L92 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 AC007969.1-201ENST00000433675 447 ntBASIC16.24■□□□□ 0.19
SNX27Q96L92 AL591846.1-201ENST00000451736 433 ntBASIC16.24■□□□□ 0.19
SNX27Q96L92 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.24■□□□□ 0.19
SNX27Q96L92 MIR4683-201ENST00000579659 81 ntBASIC16.24■□□□□ 0.19
SNX27Q96L92 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.24■□□□□ 0.19
SNX27Q96L92 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.24■□□□□ 0.19
SNX27Q96L92 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX27Q96L92 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SNX27Q96L92 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX27Q96L92 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SNX27Q96L92 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SNX27Q96L92 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
SNX27Q96L92 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX27Q96L92 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SNX27Q96L92 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX27Q96L92 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX27Q96L92 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.23■□□□□ 0.19
SNX27Q96L92 HSPB1P2-201ENST00000448722 546 ntBASIC16.23■□□□□ 0.19
SNX27Q96L92 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX27Q96L92 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.23■□□□□ 0.19
SNX27Q96L92 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.23■□□□□ 0.19
SNX27Q96L92 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.23■□□□□ 0.19
SNX27Q96L92 AL096828.3-201ENST00000615354 462 ntBASIC16.23■□□□□ 0.19
SNX27Q96L92 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.23■□□□□ 0.19
SNX27Q96L92 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX27Q96L92 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX27Q96L92 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SNX27Q96L92 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SNX27Q96L92 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX27Q96L92 AC003102.2-201ENST00000589195 1469 ntBASIC16.22■□□□□ 0.19
SNX27Q96L92 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNX27Q96L92 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNX27Q96L92 AC020910.5-201ENST00000623668 1865 ntBASIC16.22■□□□□ 0.19
SNX27Q96L92 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SNX27Q96L92 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.22■□□□□ 0.19
SNX27Q96L92 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SNX27Q96L92 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNX27Q96L92 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNX27Q96L92 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNX27Q96L92 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNX27Q96L92 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms