Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT9Q92600 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CNOT9Q92600 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT9Q92600 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT9Q92600 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT9Q92600 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT9Q92600 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CNOT9Q92600 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT9Q92600 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.98□□□□□ -0.17
CNOT9Q92600 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CNOT9Q92600 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT9Q92600 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT9Q92600 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CNOT9Q92600 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CNOT9Q92600 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 AL137783.1-201ENST00000623494 1896 ntBASIC13.97□□□□□ -0.17
CNOT9Q92600 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CNOT9Q92600 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 C1QBPP1-201ENST00000400117 770 ntBASIC13.97□□□□□ -0.17
CNOT9Q92600 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.97□□□□□ -0.17
CNOT9Q92600 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT9Q92600 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT9Q92600 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT9Q92600 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.97□□□□□ -0.17
CNOT9Q92600 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT9Q92600 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT9Q92600 AC092552.1-201ENST00000547243 906 ntBASIC13.97□□□□□ -0.17
CNOT9Q92600 AL359711.2-201ENST00000563105 872 ntBASIC13.97□□□□□ -0.17
CNOT9Q92600 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT9Q92600 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CNOT9Q92600 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT9Q92600 SPDYE22P-201ENST00000582158 798 ntBASIC13.97□□□□□ -0.17
CNOT9Q92600 RN7SL204P-201ENST00000582831 262 ntBASIC13.97□□□□□ -0.17
CNOT9Q92600 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT9Q92600 LINC02560-201ENST00000596379 459 ntBASIC13.97□□□□□ -0.17
CNOT9Q92600 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT9Q92600 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT9Q92600 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT9Q92600 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT9Q92600 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CNOT9Q92600 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT9Q92600 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CNOT9Q92600 AC018442.1-201ENST00000421439 2061 ntBASIC13.97□□□□□ -0.17
CNOT9Q92600 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CNOT9Q92600 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT9Q92600 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CNOT9Q92600 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.96□□□□□ -0.17
CNOT9Q92600 GRK6P1-201ENST00000400595 1711 ntBASIC13.96□□□□□ -0.17
CNOT9Q92600 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CNOT9Q92600 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms