Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TM9SF4Q92544 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TM9SF4Q92544 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TM9SF4Q92544 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TM9SF4Q92544 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TM9SF4Q92544 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TM9SF4Q92544 LINC00528-201ENST00000600723 2160 ntBASIC14.33□□□□□ -0.11
TM9SF4Q92544 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 AC013726.1-201ENST00000563747 2285 ntBASIC14.33□□□□□ -0.12
TM9SF4Q92544 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 AC015910.1-201ENST00000579400 975 ntBASIC14.33□□□□□ -0.12
TM9SF4Q92544 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TM9SF4Q92544 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.33□□□□□ -0.12
TM9SF4Q92544 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF4Q92544 AC139749.1-202ENST00000617529 3139 ntBASIC14.32□□□□□ -0.12
TM9SF4Q92544 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 AP001582.1-201ENST00000525856 295 ntBASIC14.32□□□□□ -0.12
TM9SF4Q92544 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 AP005019.2-201ENST00000615104 511 ntBASIC14.32□□□□□ -0.12
TM9SF4Q92544 AC008687.7-202ENST00000637404 953 ntBASIC14.32□□□□□ -0.12
TM9SF4Q92544 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms