Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC38A9Q8NBW4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 AC023090.2-201ENST00000625182 2110 ntBASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 AC005077.2-201ENST00000449786 690 ntBASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 SERPINA13P-202ENST00000478994 924 ntBASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 AL136301.1-201ENST00000615830 422 ntBASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 AC002472.3-201ENST00000640124 621 ntBASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC38A9Q8NBW4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 AC022748.3-201ENST00000621828 275 ntBASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC38A9Q8NBW4 AL138725.1-201ENST00000407347 1314 ntBASIC14.15□□□□□ -0.14
SLC38A9Q8NBW4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC38A9Q8NBW4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC38A9Q8NBW4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC38A9Q8NBW4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC38A9Q8NBW4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC38A9Q8NBW4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms