Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AC067863.1-201ENST00000494933 530 ntBASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 GPALPP1-207ENST00000611650 899 ntBASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AC006538.3-201ENST00000612495 578 ntBASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN22Q8N7P3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 AL589987.1-201ENST00000453380 819 ntBASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 ZNF890P-202ENST00000530367 1156 ntBASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 AC009407.1-201ENST00000568958 598 ntBASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 AC106028.4-201ENST00000614509 607 ntBASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 AC093512.1-201ENST00000617969 520 ntBASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 AC018665.1-201ENST00000622927 1362 ntBASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN22Q8N7P3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms