Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 LILRP1-201ENST00000444199 1370 ntBASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 SPDYE17-201ENST00000412399 783 ntBASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 RARRES2P9-201ENST00000565168 469 ntBASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AC011474.4-201ENST00000623523 2076 ntBASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 HIST3H2BA-201ENST00000436555 524 ntBASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AC026120.1-201ENST00000611536 926 ntBASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM42Q8IWZ5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms