Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 AC020910.6-201ENST00000623084 1459 ntBASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 AC004987.2-201ENST00000395959 1148 ntBASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 AC061975.2-201ENST00000581722 295 ntBASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD2Q8IV50 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 CICP1-201ENST00000416803 2410 ntBASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 IGLL3P-201ENST00000412472 434 ntBASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms