Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AC073592.2-201ENST00000623062 780 ntBASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AC112693.3-201ENST00000624819 1983 ntBASIC10.23□□□□□ -0.77
CSMD3Q7Z407 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.23□□□□□ -0.77
CSMD3Q7Z407 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 RN7SKP109-201ENST00000410592 316 ntBASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 MIR6720-201ENST00000611664 98 ntBASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AC018695.6-201ENST00000614011 534 ntBASIC10.23□□□□□ -0.77
CSMD3Q7Z407 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
CSMD3Q7Z407 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 CICP23-201ENST00000605013 2741 ntBASIC10.22□□□□□ -0.77
CSMD3Q7Z407 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 CTSL-202ENST00000342020 933 ntTSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 NHP2-202ENST00000314397 599 ntTSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC10.22□□□□□ -0.77
CSMD3Q7Z407 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 BX088702.1-201ENST00000610784 235 ntBASIC10.22□□□□□ -0.77
CSMD3Q7Z407 AC087392.5-201ENST00000612517 489 ntBASIC10.22□□□□□ -0.77
CSMD3Q7Z407 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC10.22□□□□□ -0.77
CSMD3Q7Z407 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC10.22□□□□□ -0.77
CSMD3Q7Z407 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms