Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 LRRC59-203ENST00000576448 1531 ntBASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 AC022616.1-201ENST00000518688 554 ntBASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 AC239800.4-201ENST00000603712 296 ntBASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP54Q7Z3B4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 TMEM14DP-201ENST00000422205 345 ntBASIC14□□□□□ -0.17
NUP54Q7Z3B4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 APRT-204ENST00000563655 709 ntTSL 5 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP54Q7Z3B4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14□□□□□ -0.17
NUP54Q7Z3B4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms