Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.27■□□□□ 0.04
RAPH1Q70E73 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 AC005252.3-201ENST00000623855 2258 ntBASIC15.27■□□□□ 0.04
RAPH1Q70E73 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 TSEN15P1-201ENST00000423257 515 ntBASIC15.27■□□□□ 0.04
RAPH1Q70E73 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 AC069120.2-201ENST00000524091 540 ntBASIC15.27■□□□□ 0.04
RAPH1Q70E73 AC027369.6-201ENST00000525520 931 ntBASIC15.27■□□□□ 0.04
RAPH1Q70E73 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAPH1Q70E73 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAPH1Q70E73 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAPH1Q70E73 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RAPH1Q70E73 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAPH1Q70E73 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAPH1Q70E73 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAPH1Q70E73 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAPH1Q70E73 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAPH1Q70E73 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAPH1Q70E73 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAPH1Q70E73 AC087386.2-201ENST00000623212 4637 ntBASIC15.27■□□□□ 0.03
RAPH1Q70E73 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RAPH1Q70E73 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.27■□□□□ 0.03
RAPH1Q70E73 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.27■□□□□ 0.03
RAPH1Q70E73 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 TIMM17BP1-201ENST00000545713 516 ntBASIC15.26■□□□□ 0.03
RAPH1Q70E73 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 AC004449.1-201ENST00000564240 433 ntBASIC15.26■□□□□ 0.03
RAPH1Q70E73 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAPH1Q70E73 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAPH1Q70E73 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAPH1Q70E73 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAPH1Q70E73 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAPH1Q70E73 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.25■□□□□ 0.03
RAPH1Q70E73 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms