Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 PRAL-201ENST00000624952 3286 ntBASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AC105250.1-201ENST00000509378 2057 ntBASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AC003102.2-201ENST00000589195 1469 ntBASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AL157407.1-201ENST00000435784 904 ntBASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AL035414.1-201ENST00000451327 857 ntBASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 CICP12-201ENST00000455801 843 ntBASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 MIR3677-201ENST00000578964 60 ntBASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 YRDCP1-201ENST00000621419 643 ntBASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AC009084.3-201ENST00000623356 437 ntBASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD4Q5XG99 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 AC144522.1-201ENST00000625111 1658 ntBASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 AC138894.2-201ENST00000602838 371 ntBASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 AC133540.1-201ENST00000620845 1019 ntBASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD4Q5XG99 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms