Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 PYY2-201ENST00000315776 282 ntBASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 AL022344.2-201ENST00000568976 968 ntBASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 AC002044.2-201ENST00000624910 970 ntBASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 AL162727.3-201ENST00000635661 2787 ntBASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 CELP-201ENST00000411440 1249 ntTSL 5 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 BUD31-205ENST00000456893 512 ntTSL 5 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC22.12■■□□□ 1.13
CDC42BPAQ5VT25 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPAQ5VT25 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 PSMD4P1-201ENST00000433951 1109 ntBASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 RN7SL530P-201ENST00000485097 298 ntBASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 AL109954.1-202ENST00000564051 2148 ntBASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 AC138035.3-201ENST00000622706 2791 ntBASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC22.1■■□□□ 1.13
CDC42BPAQ5VT25 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms